Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm43447-201ENSMUST00000198471 1535 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Gm5380-201ENSMUST00000119296 2136 ntBASIC17.42■□□□□ 0.38
Usp54Q8BL06 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC17.42■□□□□ 0.38
Usp54Q8BL06 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC17.42■□□□□ 0.38
Usp54Q8BL06 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Gm17877-201ENSMUST00000192578 814 ntBASIC17.42■□□□□ 0.38
Usp54Q8BL06 Gm5100-201ENSMUST00000195631 589 ntBASIC17.42■□□□□ 0.38
Usp54Q8BL06 Gm42518-201ENSMUST00000196277 938 ntBASIC17.42■□□□□ 0.38
Usp54Q8BL06 Gm3793-201ENSMUST00000204973 672 ntBASIC17.42■□□□□ 0.38
Usp54Q8BL06 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.42■□□□□ 0.38
Usp54Q8BL06 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Usp54Q8BL06 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Gm7114-201ENSMUST00000190159 1789 ntBASIC17.41■□□□□ 0.38
Usp54Q8BL06 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp54Q8BL06 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 Gm12516-201ENSMUST00000120819 385 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 Gm4879-201ENSMUST00000122190 1272 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 AC124433.1-201ENSMUST00000224483 1063 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 AC115122.1-201ENSMUST00000224850 1040 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 AC122350.1-201ENSMUST00000228135 533 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Gm17213-201ENSMUST00000165161 1360 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Gm13182-201ENSMUST00000122241 312 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms