Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Gm22121-201ENSMUST00000175148 54 ntBASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Gm10146-201ENSMUST00000072739 309 ntBASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc40Q8BI79 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Mir339-201ENSMUST00000083659 96 ntBASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms