Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf38Q8BI21 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf38Q8BI21 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Rnf38Q8BI21 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf38Q8BI21 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf38Q8BI21 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf38Q8BI21 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf38Q8BI21 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm23363-201ENSMUST00000175024 79 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm27390-201ENSMUST00000184516 176 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm37042-201ENSMUST00000193816 581 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm37922-201ENSMUST00000195596 455 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm37497-201ENSMUST00000195830 798 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm32025-201ENSMUST00000217960 307 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm10012-201ENSMUST00000078252 192 ntBASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf38Q8BI21 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Gm12203-201ENSMUST00000118235 598 ntBASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Gm14921-201ENSMUST00000118643 908 ntBASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Gm12209-201ENSMUST00000120089 596 ntBASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Gm10146-201ENSMUST00000072739 309 ntBASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf38Q8BI21 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms