Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gm9522-201ENSMUST00000182394 926 ntBASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm14921-201ENSMUST00000118643 908 ntBASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm21854-201ENSMUST00000179901 471 ntBASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm9063-201ENSMUST00000223299 582 ntBASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc5a7Q8BGY9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms