Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Gm13385-201ENSMUST00000121089 220 ntBASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Gm18187-201ENSMUST00000196476 984 ntBASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Gm18307-201ENSMUST00000206864 949 ntBASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Gm45841-201ENSMUST00000207700 164 ntBASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smndc1Q8BGT7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smndc1Q8BGT7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smndc1Q8BGT7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms