Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Gm9630-201ENSMUST00000178304 885 ntBASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Mir6392-201ENSMUST00000184924 108 ntBASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Gm19184-201ENSMUST00000196798 928 ntBASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Gm26035-201ENSMUST00000083065 308 ntBASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim6Q8BGE7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Gm18624-201ENSMUST00000220966 658 ntBASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Mir339-201ENSMUST00000083659 96 ntBASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim6Q8BGE7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Cog3-203ENSMUST00000227473 4197 ntBASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.26□□□□□ -0.29
Trim6Q8BGE7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim6Q8BGE7 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.26□□□□□ -0.29
Trim6Q8BGE7 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms