Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Gm7399-201ENSMUST00000032395 858 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm13316-201ENSMUST00000140537 691 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm42660-201ENSMUST00000197733 947 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm43438-201ENSMUST00000198133 379 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm40332-201ENSMUST00000199847 938 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubp1Q811S7 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.36□□□□□ -0.43
Ubp1Q811S7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.35□□□□□ -0.43
Ubp1Q811S7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.35□□□□□ -0.43
Ubp1Q811S7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.35□□□□□ -0.43
Ubp1Q811S7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.35□□□□□ -0.43
Ubp1Q811S7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms