Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.08□□□□□ -0.48
Trim36Q80WG7 Gm8213-201ENSMUST00000118191 441 ntBASIC12.08□□□□□ -0.48
Trim36Q80WG7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Gm45331-201ENSMUST00000209868 554 ntBASIC12.08□□□□□ -0.48
Trim36Q80WG7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.08□□□□□ -0.48
Trim36Q80WG7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.08□□□□□ -0.48
Trim36Q80WG7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim36Q80WG7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.07□□□□□ -0.48
Trim36Q80WG7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.07□□□□□ -0.48
Trim36Q80WG7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.07□□□□□ -0.48
Trim36Q80WG7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.07□□□□□ -0.48
Trim36Q80WG7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.07□□□□□ -0.48
Trim36Q80WG7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.07□□□□□ -0.48
Trim36Q80WG7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.07□□□□□ -0.48
Trim36Q80WG7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.07□□□□□ -0.48
Trim36Q80WG7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim36Q80WG7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.06□□□□□ -0.48
Trim36Q80WG7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim36Q80WG7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms