Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp8Q80U87 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.56□□□□□ -0.4
Usp8Q80U87 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp8Q80U87 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm11637-201ENSMUST00000120601 592 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Usp8Q80U87 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm27892-201ENSMUST00000185017 106 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.56□□□□□ -0.4
Usp8Q80U87 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp8Q80U87 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Gm14921-201ENSMUST00000118643 908 ntBASIC12.55□□□□□ -0.4
Usp8Q80U87 Gm15806-201ENSMUST00000120696 955 ntBASIC12.55□□□□□ -0.4
Usp8Q80U87 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.55□□□□□ -0.4
Usp8Q80U87 Gm9794-201ENSMUST00000202370 423 ntBASIC12.55□□□□□ -0.4
Usp8Q80U87 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp8Q80U87 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.55□□□□□ -0.4
Usp8Q80U87 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.55□□□□□ -0.4
Usp8Q80U87 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp8Q80U87 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp8Q80U87 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms