Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Snora73b-201ENSMUST00000083419 205 ntBASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx55Q6ZPL9 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm12795-201ENSMUST00000117594 539 ntBASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm11511-201ENSMUST00000118146 540 ntBASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm14760-201ENSMUST00000121831 999 ntBASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm37905-201ENSMUST00000195310 341 ntBASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm17831-201ENSMUST00000205579 900 ntBASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx55Q6ZPL9 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Gm22144-201ENSMUST00000157402 102 ntBASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Rprl1-201ENSMUST00000158050 327 ntBASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Gm9358-201ENSMUST00000183067 927 ntBASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx55Q6ZPL9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Gm14585-201ENSMUST00000120713 634 ntBASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Gm15595-201ENSMUST00000120840 961 ntBASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms