Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.56□□□□□ -0.72
Rif1Q6PR54 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.56□□□□□ -0.72
Rif1Q6PR54 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.56□□□□□ -0.72
Rif1Q6PR54 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.56□□□□□ -0.72
Rif1Q6PR54 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm12345-201ENSMUST00000119288 898 ntBASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm11956-201ENSMUST00000119525 512 ntBASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rif1Q6PR54 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm24279-201ENSMUST00000104236 131 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm4462-201ENSMUST00000166453 492 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm17070-201ENSMUST00000170463 784 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm26134-201ENSMUST00000178484 110 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms