Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Nup98Q6PFD9 Gm9136-201ENSMUST00000193368 454 ntBASIC14.48□□□□□ -0.09
Nup98Q6PFD9 Gm2553-201ENSMUST00000215986 605 ntBASIC14.48□□□□□ -0.09
Nup98Q6PFD9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup98Q6PFD9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup98Q6PFD9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nup98Q6PFD9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nup98Q6PFD9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm12419-201ENSMUST00000116649 636 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm23045-201ENSMUST00000175041 96 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm29499-201ENSMUST00000189151 486 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm28329-201ENSMUST00000191208 689 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm29171-201ENSMUST00000191397 486 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup98Q6PFD9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Gm37458-201ENSMUST00000194055 410 ntBASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.46□□□□□ -0.09
Nup98Q6PFD9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup98Q6PFD9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nup98Q6PFD9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Nup98Q6PFD9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nup98Q6PFD9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nup98Q6PFD9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nup98Q6PFD9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nup98Q6PFD9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nup98Q6PFD9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nup98Q6PFD9 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gm13916-201ENSMUST00000117368 628 ntBASIC14.45□□□□□ -0.1
Nup98Q6PFD9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gm5714-201ENSMUST00000197343 566 ntBASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.45□□□□□ -0.1
Nup98Q6PFD9 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gm44545-201ENSMUST00000208262 746 ntBASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms