Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.29□□□□□ -0.28
CtifQ6PEE2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC13.29□□□□□ -0.28
CtifQ6PEE2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.28□□□□□ -0.28
CtifQ6PEE2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CtifQ6PEE2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.28□□□□□ -0.28
CtifQ6PEE2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.28□□□□□ -0.28
CtifQ6PEE2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CtifQ6PEE2 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.27□□□□□ -0.28
CtifQ6PEE2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.27□□□□□ -0.28
CtifQ6PEE2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CtifQ6PEE2 Gm25287-201ENSMUST00000103846 110 ntBASIC13.27□□□□□ -0.29
CtifQ6PEE2 Gm22918-201ENSMUST00000103855 110 ntBASIC13.27□□□□□ -0.29
CtifQ6PEE2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CtifQ6PEE2 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.27□□□□□ -0.29
CtifQ6PEE2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Mir339-201ENSMUST00000083659 96 ntBASIC13.27□□□□□ -0.29
CtifQ6PEE2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CtifQ6PEE2 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.27□□□□□ -0.29
CtifQ6PEE2 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.27□□□□□ -0.29
CtifQ6PEE2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms