Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm17795-201ENSMUST00000214505 757 ntBASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf220Q6PDX6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.83□□□□□ -0.51
Rnf220Q6PDX6 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.83□□□□□ -0.51
Rnf220Q6PDX6 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf220Q6PDX6 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.83□□□□□ -0.51
Rnf220Q6PDX6 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf220Q6PDX6 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf220Q6PDX6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Gm45841-201ENSMUST00000207700 164 ntBASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Gm24447-201ENSMUST00000083977 338 ntBASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf220Q6PDX6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms