Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.06□□□□□ -0.48
Sdc3Q64519 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.06□□□□□ -0.48
Sdc3Q64519 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.05□□□□□ -0.48
Sdc3Q64519 Daam2-202ENSMUST00000224595 1926 ntBASIC12.05□□□□□ -0.48
Sdc3Q64519 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Matn2-203ENSMUST00000226766 3252 ntBASIC12.05□□□□□ -0.48
Sdc3Q64519 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Gm12291-201ENSMUST00000121627 311 ntBASIC12.05□□□□□ -0.48
Sdc3Q64519 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.05□□□□□ -0.48
Sdc3Q64519 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.05□□□□□ -0.48
Sdc3Q64519 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sdc3Q64519 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sdc3Q64519 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.05□□□□□ -0.48
Sdc3Q64519 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.05□□□□□ -0.48
Sdc3Q64519 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Sdc3Q64519 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Sdc3Q64519 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sdc3Q64519 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc3Q64519 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.04□□□□□ -0.48
Sdc3Q64519 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sdc3Q64519 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Gm10434-201ENSMUST00000101158 471 ntBASIC12.04□□□□□ -0.48
Sdc3Q64519 Gm13875-201ENSMUST00000120162 282 ntBASIC12.04□□□□□ -0.48
Sdc3Q64519 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.04□□□□□ -0.48
Sdc3Q64519 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.04□□□□□ -0.48
Sdc3Q64519 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms