Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ndufa4Q62425 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gm9797-201ENSMUST00000052902 613 ntBASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gm20445-201ENSMUST00000061905 565 ntBASIC9.03□□□□□ -0.96
Ndufa4Q62425 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.03□□□□□ -0.96
Ndufa4Q62425 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.02□□□□□ -0.96
Ndufa4Q62425 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ndufa4Q62425 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Ndufa4Q62425 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ndufa4Q62425 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ndufa4Q62425 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.02□□□□□ -0.97
Ndufa4Q62425 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Gm14822-201ENSMUST00000122247 291 ntBASIC9.02□□□□□ -0.97
Ndufa4Q62425 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.02□□□□□ -0.97
Ndufa4Q62425 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ndufa4Q62425 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms