Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm45266-201ENSMUST00000210111 2173 ntBASIC13□□□□□ -0.33
Smarcd1Q61466 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Gm24934-201ENSMUST00000103764 111 ntBASIC13□□□□□ -0.33
Smarcd1Q61466 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13□□□□□ -0.33
Smarcd1Q61466 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13□□□□□ -0.33
Smarcd1Q61466 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Gm4819-201ENSMUST00000182170 1009 ntBASIC13□□□□□ -0.33
Smarcd1Q61466 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Gm44967-201ENSMUST00000207047 631 ntBASIC13□□□□□ -0.33
Smarcd1Q61466 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13□□□□□ -0.33
Smarcd1Q61466 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Gm44942-201ENSMUST00000096093 2072 ntBASIC13□□□□□ -0.33
Smarcd1Q61466 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Smarcd1Q61466 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smarcd1Q61466 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.99□□□□□ -0.33
Smarcd1Q61466 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.99□□□□□ -0.33
Smarcd1Q61466 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.99□□□□□ -0.33
Smarcd1Q61466 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.99□□□□□ -0.33
Smarcd1Q61466 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.99□□□□□ -0.33
Smarcd1Q61466 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd1Q61466 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gm12015-201ENSMUST00000117065 843 ntBASIC12.98□□□□□ -0.33
Smarcd1Q61466 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gm9630-201ENSMUST00000178304 885 ntBASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.98□□□□□ -0.33
Smarcd1Q61466 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms