Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vsx2Q61412 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.19□□□□□ -0.46
Vsx2Q61412 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm6023-201ENSMUST00000118217 606 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm12502-201ENSMUST00000120197 444 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.19□□□□□ -0.46
Vsx2Q61412 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm23363-201ENSMUST00000175024 79 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.19□□□□□ -0.46
Vsx2Q61412 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vsx2Q61412 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.19□□□□□ -0.46
Vsx2Q61412 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx2Q61412 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.18□□□□□ -0.46
Vsx2Q61412 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Gm8738-201ENSMUST00000172606 329 ntBASIC12.18□□□□□ -0.46
Vsx2Q61412 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Gm42627-201ENSMUST00000197347 224 ntBASIC12.18□□□□□ -0.46
Vsx2Q61412 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vsx2Q61412 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx2Q61412 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vsx2Q61412 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vsx2Q61412 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.17□□□□□ -0.46
Vsx2Q61412 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Vsx2Q61412 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Gm12291-201ENSMUST00000121627 311 ntBASIC12.17□□□□□ -0.46
Vsx2Q61412 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms