Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Ift88Q61371 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ift88Q61371 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ift88Q61371 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Gm42599-201ENSMUST00000201308 469 ntBASIC13.81□□□□□ -0.2
Ift88Q61371 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.81□□□□□ -0.2
Ift88Q61371 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Gm9908-201ENSMUST00000211534 448 ntBASIC13.81□□□□□ -0.2
Ift88Q61371 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ift88Q61371 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.81□□□□□ -0.2
Ift88Q61371 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ift88Q61371 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Ift88Q61371 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.81□□□□□ -0.2
Ift88Q61371 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ift88Q61371 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.81□□□□□ -0.2
Ift88Q61371 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ift88Q61371 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Gm12363-201ENSMUST00000122250 668 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.8□□□□□ -0.2
Ift88Q61371 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Rmrp-201ENSMUST00000157463 271 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.8□□□□□ -0.2
Ift88Q61371 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Ift88Q61371 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.8□□□□□ -0.2
Ift88Q61371 Gm6244-201ENSMUST00000178732 841 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.8□□□□□ -0.2
Ift88Q61371 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.8□□□□□ -0.2
Ift88Q61371 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Gm24526-201ENSMUST00000082921 158 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ift88Q61371 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Ift88Q61371 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.8□□□□□ -0.2
Ift88Q61371 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ift88Q61371 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ift88Q61371 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.8□□□□□ -0.2
Ift88Q61371 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ift88Q61371 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ift88Q61371 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ift88Q61371 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ift88Q61371 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.79□□□□□ -0.2
Ift88Q61371 Gm14928-201ENSMUST00000120198 477 ntBASIC13.79□□□□□ -0.2
Ift88Q61371 Mir1894-201ENSMUST00000122802 81 ntBASIC13.79□□□□□ -0.2
Ift88Q61371 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.79□□□□□ -0.2
Ift88Q61371 Gm24196-201ENSMUST00000179161 110 ntBASIC13.79□□□□□ -0.2
Ift88Q61371 Gm38092-201ENSMUST00000195600 653 ntBASIC13.79□□□□□ -0.2
Ift88Q61371 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.79□□□□□ -0.2
Ift88Q61371 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.79□□□□□ -0.2
Ift88Q61371 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ift88Q61371 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.79□□□□□ -0.2
Ift88Q61371 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ift88Q61371 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.79□□□□□ -0.2
Ift88Q61371 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ift88Q61371 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms