Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ripk1Q60855 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ripk1Q60855 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ripk1Q60855 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ripk1Q60855 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Ripk1Q60855 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.79□□□□□ -0.52
Ripk1Q60855 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.79□□□□□ -0.52
Ripk1Q60855 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.79□□□□□ -0.52
Ripk1Q60855 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.79□□□□□ -0.52
Ripk1Q60855 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.79□□□□□ -0.52
Ripk1Q60855 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ripk1Q60855 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ripk1Q60855 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.78□□□□□ -0.52
Ripk1Q60855 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.78□□□□□ -0.52
Ripk1Q60855 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Gm15824-201ENSMUST00000119516 955 ntBASIC11.78□□□□□ -0.52
Ripk1Q60855 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.78□□□□□ -0.52
Ripk1Q60855 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.78□□□□□ -0.52
Ripk1Q60855 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.78□□□□□ -0.52
Ripk1Q60855 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.78□□□□□ -0.52
Ripk1Q60855 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.78□□□□□ -0.52
Ripk1Q60855 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.78□□□□□ -0.52
Ripk1Q60855 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ripk1Q60855 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms