Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.92□□□□□ -0.5
Nr1h4Q60641 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.92□□□□□ -0.5
Nr1h4Q60641 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm12928-201ENSMUST00000117115 573 ntBASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm23363-201ENSMUST00000175024 79 ntBASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm44855-201ENSMUST00000205725 362 ntBASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.92□□□□□ -0.5
Nr1h4Q60641 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.92□□□□□ -0.5
Nr1h4Q60641 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.91□□□□□ -0.5
Nr1h4Q60641 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gm14704-201ENSMUST00000120300 874 ntBASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gm14760-201ENSMUST00000121831 999 ntBASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.91□□□□□ -0.5
Nr1h4Q60641 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.91□□□□□ -0.5
Nr1h4Q60641 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.91□□□□□ -0.5
Nr1h4Q60641 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nr1h4Q60641 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.9□□□□□ -0.5
Nr1h4Q60641 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Gm2495-201ENSMUST00000191160 466 ntBASIC11.9□□□□□ -0.5
Nr1h4Q60641 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.9□□□□□ -0.5
Nr1h4Q60641 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.9□□□□□ -0.5
Nr1h4Q60641 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.9□□□□□ -0.5
Nr1h4Q60641 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Gm8227-201ENSMUST00000223306 571 ntBASIC11.9□□□□□ -0.5
Nr1h4Q60641 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms