Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.58□□□□□ -0.08
Prdm1Q60636 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prdm1Q60636 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prdm1Q60636 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prdm1Q60636 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prdm1Q60636 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prdm1Q60636 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prdm1Q60636 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prdm1Q60636 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.57□□□□□ -0.08
Prdm1Q60636 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm23270-201ENSMUST00000104055 131 ntBASIC14.57□□□□□ -0.08
Prdm1Q60636 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm27023-201ENSMUST00000182372 285 ntBASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.57□□□□□ -0.08
Prdm1Q60636 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.57□□□□□ -0.08
Prdm1Q60636 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Prdm1Q60636 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prdm1Q60636 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Gm13350-201ENSMUST00000120519 479 ntBASIC14.56□□□□□ -0.08
Prdm1Q60636 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.56□□□□□ -0.08
Prdm1Q60636 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Gm26956-201ENSMUST00000182176 986 ntBASIC14.56□□□□□ -0.08
Prdm1Q60636 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.56□□□□□ -0.08
Prdm1Q60636 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.56□□□□□ -0.08
Prdm1Q60636 Gm7783-201ENSMUST00000204795 781 ntBASIC14.56□□□□□ -0.08
Prdm1Q60636 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.56□□□□□ -0.08
Prdm1Q60636 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Prdm1Q60636 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prdm1Q60636 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.56□□□□□ -0.08
Prdm1Q60636 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Prdm1Q60636 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Prdm1Q60636 Gm9083-201ENSMUST00000120423 819 ntBASIC14.55□□□□□ -0.08
Prdm1Q60636 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms