Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Gm6007-201ENSMUST00000208170 823 ntBASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Gm24136-201ENSMUST00000083374 165 ntBASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm13315-201ENSMUST00000120376 991 ntBASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm11597-201ENSMUST00000121423 964 ntBASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm9022-201ENSMUST00000182482 992 ntBASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf20Q5DTM8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Gm27243-201ENSMUST00000183964 521 ntBASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf20Q5DTM8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms