Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
R3hdm4Q4VBF2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Gm14726-201ENSMUST00000120623 896 ntBASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
R3hdm4Q4VBF2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Gm31256-201ENSMUST00000194705 506 ntBASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
R3hdm4Q4VBF2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.42□□□□□ -0.26
R3hdm4Q4VBF2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms