Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cops9Q3U898 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cops9Q3U898 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.04
Cops9Q3U898 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.04
Cops9Q3U898 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Gm17968-201ENSMUST00000194902 784 ntBASIC8.52□□□□□ -1.05
Cops9Q3U898 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Gm42690-201ENSMUST00000197921 1836 ntBASIC8.52□□□□□ -1.05
Cops9Q3U898 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Cops9Q3U898 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cops9Q3U898 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 AC129336.1-201ENSMUST00000220224 2277 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm43858-201ENSMUST00000199418 1778 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm25287-201ENSMUST00000103846 110 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm22918-201ENSMUST00000103855 110 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm13884-201ENSMUST00000118103 829 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm7820-201ENSMUST00000121012 1052 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm11452-201ENSMUST00000122376 690 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm38297-201ENSMUST00000195122 1057 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC8.51□□□□□ -1.05
Cops9Q3U898 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Cops9Q3U898 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cops9Q3U898 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms