Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.87□□□□□ -0.67
Q3U1D9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.87□□□□□ -0.67
Q3U1D9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Q3U1D9 Gm2260-201ENSMUST00000184965 657 ntBASIC10.87□□□□□ -0.67
Q3U1D9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.87□□□□□ -0.67
Q3U1D9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.87□□□□□ -0.67
Q3U1D9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.87□□□□□ -0.67
Q3U1D9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.87□□□□□ -0.67
Q3U1D9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Q3U1D9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.87□□□□□ -0.67
Q3U1D9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Q3U1D9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Q3U1D9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.86□□□□□ -0.67
Q3U1D9 Gm24845-201ENSMUST00000158034 109 ntBASIC10.86□□□□□ -0.67
Q3U1D9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.86□□□□□ -0.67
Q3U1D9 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.86□□□□□ -0.67
Q3U1D9 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.86□□□□□ -0.67
Q3U1D9 Gm26461-201ENSMUST00000175064 290 ntBASIC10.86□□□□□ -0.67
Q3U1D9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Gm25700-201ENSMUST00000177693 110 ntBASIC10.86□□□□□ -0.67
Q3U1D9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.86□□□□□ -0.67
Q3U1D9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.86□□□□□ -0.67
Q3U1D9 Gm19208-201ENSMUST00000213861 912 ntBASIC10.86□□□□□ -0.67
Q3U1D9 Gzmn-202ENSMUST00000225535 989 ntBASIC10.86□□□□□ -0.67
Q3U1D9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Q3U1D9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.86□□□□□ -0.67
Q3U1D9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Q3U1D9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.85□□□□□ -0.67
Q3U1D9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Q3U1D9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Gm24990-201ENSMUST00000157406 323 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms