Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Tff1Q08423 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm8805-201ENSMUST00000117848 313 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Gm13612-201ENSMUST00000119276 390 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm24196-201ENSMUST00000179161 110 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm38266-201ENSMUST00000194931 421 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm43822-201ENSMUST00000200285 476 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Gm3961-201ENSMUST00000204425 994 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.39□□□□□ -0.75
Tff1Q08423 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tff1Q08423 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tff1Q08423 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tff1Q08423 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.39□□□□□ -0.75
Tff1Q08423 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tff1Q08423 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tff1Q08423 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tff1Q08423 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tff1Q08423 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.38□□□□□ -0.75
Tff1Q08423 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.38□□□□□ -0.75
Tff1Q08423 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Tff1Q08423 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.38□□□□□ -0.75
Tff1Q08423 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.38□□□□□ -0.75
Tff1Q08423 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Gm27514-201ENSMUST00000183692 110 ntBASIC10.38□□□□□ -0.75
Tff1Q08423 Gm28693-202ENSMUST00000190758 331 ntBASIC10.38□□□□□ -0.75
Tff1Q08423 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.38□□□□□ -0.75
Tff1Q08423 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.38□□□□□ -0.75
Tff1Q08423 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.38□□□□□ -0.75
Tff1Q08423 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tff1Q08423 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tff1Q08423 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.38□□□□□ -0.75
Tff1Q08423 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tff1Q08423 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.38□□□□□ -0.75
Tff1Q08423 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.38□□□□□ -0.75
Tff1Q08423 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tff1Q08423 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms