Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.68□□□□□ -0.86
Cdx4Q07424 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.68□□□□□ -0.86
Cdx4Q07424 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.68□□□□□ -0.86
Cdx4Q07424 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Gm38002-201ENSMUST00000193255 180 ntBASIC9.68□□□□□ -0.86
Cdx4Q07424 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.68□□□□□ -0.86
Cdx4Q07424 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cdx4Q07424 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx4Q07424 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.67□□□□□ -0.86
Cdx4Q07424 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Mir1247-201ENSMUST00000116706 82 ntBASIC9.67□□□□□ -0.86
Cdx4Q07424 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm13123-201ENSMUST00000122173 492 ntBASIC9.67□□□□□ -0.86
Cdx4Q07424 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm25927-201ENSMUST00000175058 117 ntBASIC9.67□□□□□ -0.86
Cdx4Q07424 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm3961-201ENSMUST00000204425 994 ntBASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.67□□□□□ -0.86
Cdx4Q07424 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx4Q07424 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Cdx4Q07424 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cdx4Q07424 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.66□□□□□ -0.86
Cdx4Q07424 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx4Q07424 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms