Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col9a1Q05722 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col9a1Q05722 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a1Q05722 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm13678-201ENSMUST00000118926 340 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm15741-201ENSMUST00000119401 754 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm22846-201ENSMUST00000157706 270 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm24845-201ENSMUST00000158034 109 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm26875-201ENSMUST00000181006 950 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm9135-201ENSMUST00000182963 990 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm18801-201ENSMUST00000186616 536 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm38117-201ENSMUST00000194653 939 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm38154-201ENSMUST00000195444 340 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm8920-201ENSMUST00000196153 924 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm42782-201ENSMUST00000197286 522 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm44158-201ENSMUST00000203881 505 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm18123-201ENSMUST00000210874 822 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.48□□□□□ -0.41
Col9a1Q05722 AC158392.1-201ENSMUST00000223720 1069 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.48□□□□□ -0.41
Col9a1Q05722 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.48□□□□□ -0.41
Col9a1Q05722 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a1Q05722 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.47□□□□□ -0.41
Col9a1Q05722 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.47□□□□□ -0.41
Col9a1Q05722 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col9a1Q05722 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.47□□□□□ -0.41
Col9a1Q05722 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col9a1Q05722 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col9a1Q05722 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col9a1Q05722 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Col9a1Q05722 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a1Q05722 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms