Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.17□□□□□ -0.3
Sox8Q04886 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.17□□□□□ -0.3
Sox8Q04886 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox8Q04886 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.17□□□□□ -0.3
Sox8Q04886 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox8Q04886 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sox8Q04886 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox8Q04886 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Sox8Q04886 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox8Q04886 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Gm44262-201ENSMUST00000204969 372 ntBASIC13.17□□□□□ -0.3
Sox8Q04886 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox8Q04886 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox8Q04886 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sox8Q04886 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Sox8Q04886 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.17□□□□□ -0.3
Sox8Q04886 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.17□□□□□ -0.3
Sox8Q04886 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox8Q04886 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox8Q04886 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox8Q04886 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Sox8Q04886 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox8Q04886 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox8Q04886 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox8Q04886 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.16□□□□□ -0.3
Sox8Q04886 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Sox8Q04886 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.16□□□□□ -0.3
Sox8Q04886 Gm23119-201ENSMUST00000158610 140 ntBASIC13.16□□□□□ -0.3
Sox8Q04886 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Sox8Q04886 Gm5070-201ENSMUST00000177599 862 ntBASIC13.16□□□□□ -0.3
Sox8Q04886 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox8Q04886 Gm45186-201ENSMUST00000206874 478 ntBASIC13.16□□□□□ -0.3
Sox8Q04886 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.16□□□□□ -0.3
Sox8Q04886 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.16□□□□□ -0.3
Sox8Q04886 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox8Q04886 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.16□□□□□ -0.3
Sox8Q04886 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox8Q04886 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.16□□□□□ -0.3
Sox8Q04886 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.15□□□□□ -0.3
Sox8Q04886 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox8Q04886 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox8Q04886 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox8Q04886 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox8Q04886 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sox8Q04886 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox8Q04886 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox8Q04886 Gm12997-201ENSMUST00000120207 640 ntBASIC13.15□□□□□ -0.3
Sox8Q04886 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.15□□□□□ -0.3
Sox8Q04886 Gm13665-201ENSMUST00000120830 528 ntBASIC13.15□□□□□ -0.3
Sox8Q04886 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox8Q04886 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox8Q04886 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms