Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.37□□□□□ -0.27
VcpQ01853 Gm12624-201ENSMUST00000177615 382 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm12621-201ENSMUST00000177760 382 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm12615-201ENSMUST00000177970 382 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm12622-201ENSMUST00000177975 382 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm12627-201ENSMUST00000178412 382 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm12625-201ENSMUST00000179122 382 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm12614-201ENSMUST00000179586 382 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm12613-201ENSMUST00000180323 382 ntBASIC13.37□□□□□ -0.27
VcpQ01853 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Gm3508-201ENSMUST00000186012 792 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm37835-201ENSMUST00000193305 361 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Gm44100-201ENSMUST00000204329 436 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm45118-201ENSMUST00000208928 825 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.37□□□□□ -0.27
VcpQ01853 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Gm19163-201ENSMUST00000223313 780 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
VcpQ01853 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.37□□□□□ -0.27
VcpQ01853 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.37□□□□□ -0.27
VcpQ01853 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.37□□□□□ -0.27
VcpQ01853 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcpQ01853 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.36□□□□□ -0.27
VcpQ01853 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VcpQ01853 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Gm14208-201ENSMUST00000119645 678 ntBASIC13.36□□□□□ -0.27
VcpQ01853 Gm9083-201ENSMUST00000120423 819 ntBASIC13.36□□□□□ -0.27
VcpQ01853 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.36□□□□□ -0.27
VcpQ01853 Gm13570-201ENSMUST00000140763 309 ntBASIC13.36□□□□□ -0.27
VcpQ01853 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Gm7467-201ENSMUST00000185173 652 ntBASIC13.36□□□□□ -0.27
VcpQ01853 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.36□□□□□ -0.27
VcpQ01853 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.36□□□□□ -0.27
VcpQ01853 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.36□□□□□ -0.27
VcpQ01853 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.36□□□□□ -0.27
VcpQ01853 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcpQ01853 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VcpQ01853 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VcpQ01853 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Gm14130-201ENSMUST00000118417 987 ntBASIC13.35□□□□□ -0.27
VcpQ01853 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.35□□□□□ -0.27
VcpQ01853 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.35□□□□□ -0.27
VcpQ01853 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.35□□□□□ -0.27
VcpQ01853 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.35□□□□□ -0.27
VcpQ01853 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.35□□□□□ -0.27
VcpQ01853 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.35□□□□□ -0.27
VcpQ01853 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.35□□□□□ -0.27
VcpQ01853 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VcpQ01853 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VcpQ01853 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms