Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.15□□□□□ -0.14
GabpaQ00422 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.15□□□□□ -0.14
GabpaQ00422 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
GabpaQ00422 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GabpaQ00422 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.15□□□□□ -0.14
GabpaQ00422 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GabpaQ00422 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.15□□□□□ -0.14
GabpaQ00422 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.15□□□□□ -0.14
GabpaQ00422 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.15□□□□□ -0.14
GabpaQ00422 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GabpaQ00422 Gm26035-201ENSMUST00000083065 308 ntBASIC14.15□□□□□ -0.14
GabpaQ00422 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.15□□□□□ -0.14
GabpaQ00422 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.15□□□□□ -0.14
GabpaQ00422 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.15□□□□□ -0.14
GabpaQ00422 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
GabpaQ00422 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
GabpaQ00422 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.14□□□□□ -0.15
GabpaQ00422 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.14□□□□□ -0.15
GabpaQ00422 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GabpaQ00422 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GabpaQ00422 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GabpaQ00422 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Gm12266-201ENSMUST00000120311 962 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.14□□□□□ -0.15
GabpaQ00422 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.14□□□□□ -0.15
GabpaQ00422 Gm29615-201ENSMUST00000185371 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm28224-201ENSMUST00000186078 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm29001-201ENSMUST00000186177 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm28292-201ENSMUST00000186593 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm28101-201ENSMUST00000187608 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm29076-201ENSMUST00000187689 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm28302-201ENSMUST00000187931 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm28646-201ENSMUST00000188220 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm28205-201ENSMUST00000189177 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm29032-201ENSMUST00000189797 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm28695-201ENSMUST00000190300 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Gm37448-201ENSMUST00000192795 697 ntBASIC14.14□□□□□ -0.15
GabpaQ00422 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GabpaQ00422 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.14□□□□□ -0.15
GabpaQ00422 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.14□□□□□ -0.15
GabpaQ00422 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
GabpaQ00422 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GabpaQ00422 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.13□□□□□ -0.15
GabpaQ00422 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GabpaQ00422 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GabpaQ00422 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.13□□□□□ -0.15
GabpaQ00422 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Gm23949-201ENSMUST00000104027 127 ntBASIC14.13□□□□□ -0.15
GabpaQ00422 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.13□□□□□ -0.15
GabpaQ00422 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.13□□□□□ -0.15
GabpaQ00422 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.13□□□□□ -0.15
GabpaQ00422 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.13□□□□□ -0.15
GabpaQ00422 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.13□□□□□ -0.15
GabpaQ00422 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Gm18730-201ENSMUST00000218038 343 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms