Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC17.34■□□□□ 0.37
Xrn1P97789 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC17.34■□□□□ 0.37
Xrn1P97789 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC17.34■□□□□ 0.37
Xrn1P97789 Gm22877-201ENSMUST00000175451 105 ntBASIC17.34■□□□□ 0.37
Xrn1P97789 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Xrn1P97789 Gm9116-201ENSMUST00000192400 1018 ntBASIC17.34■□□□□ 0.37
Xrn1P97789 Gm6108-201ENSMUST00000208365 367 ntBASIC17.34■□□□□ 0.37
Xrn1P97789 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC17.34■□□□□ 0.37
Xrn1P97789 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Xrn1P97789 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Xrn1P97789 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC17.34■□□□□ 0.37
Xrn1P97789 Gm23680-201ENSMUST00000083162 164 ntBASIC17.34■□□□□ 0.37
Xrn1P97789 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Xrn1P97789 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrn1P97789 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Xrn1P97789 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Xrn1P97789 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC17.34■□□□□ 0.37
Xrn1P97789 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrn1P97789 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Xrn1P97789 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrn1P97789 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrn1P97789 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrn1P97789 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrn1P97789 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.33■□□□□ 0.37
Xrn1P97789 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC17.33■□□□□ 0.37
Xrn1P97789 AC113082.1-201ENSMUST00000217324 327 ntBASIC17.33■□□□□ 0.37
Xrn1P97789 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrn1P97789 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Xrn1P97789 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Xrn1P97789 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC17.33■□□□□ 0.36
Xrn1P97789 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Gm8723-201ENSMUST00000166076 820 ntBASIC17.33■□□□□ 0.36
Xrn1P97789 Gm17192-201ENSMUST00000169031 511 ntBASIC17.33■□□□□ 0.36
Xrn1P97789 Gm8701-201ENSMUST00000169259 874 ntBASIC17.33■□□□□ 0.36
Xrn1P97789 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC17.33■□□□□ 0.36
Xrn1P97789 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrn1P97789 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Xrn1P97789 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Map1b-203ENSMUST00000223725 2669 ntBASIC17.32■□□□□ 0.36
Xrn1P97789 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Xrn1P97789 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC17.32■□□□□ 0.36
Xrn1P97789 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC17.32■□□□□ 0.36
Xrn1P97789 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Xrn1P97789 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Xrn1P97789 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrn1P97789 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Xrn1P97789 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Xrn1P97789 Gm44414-201ENSMUST00000203660 2109 ntBASIC17.31■□□□□ 0.36
Xrn1P97789 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 AC123834.1-201ENSMUST00000225346 2043 ntBASIC17.31■□□□□ 0.36
Xrn1P97789 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Xrn1P97789 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Xrn1P97789 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC17.31■□□□□ 0.36
Xrn1P97789 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC17.31■□□□□ 0.36
Xrn1P97789 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Xrn1P97789 Gm18201-201ENSMUST00000174735 875 ntBASIC17.31■□□□□ 0.36
Xrn1P97789 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 Gm6450-201ENSMUST00000200896 574 ntBASIC17.31■□□□□ 0.36
Xrn1P97789 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrn1P97789 Gm17825-201ENSMUST00000206836 794 ntBASIC17.31■□□□□ 0.36
Xrn1P97789 Gm4811-201ENSMUST00000220879 1220 ntBASIC17.31■□□□□ 0.36
Xrn1P97789 AC140375.1-201ENSMUST00000225421 694 ntBASIC17.31■□□□□ 0.36
Xrn1P97789 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC17.31■□□□□ 0.36
Xrn1P97789 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Xrn1P97789 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms