Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.5□□□□□ -0.73
Npas1P97459 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.5□□□□□ -0.73
Npas1P97459 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.49□□□□□ -0.73
Npas1P97459 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Npas1P97459 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Npas1P97459 Gm23935-201ENSMUST00000102303 57 ntBASIC10.49□□□□□ -0.73
Npas1P97459 Gm24270-201ENSMUST00000102326 57 ntBASIC10.49□□□□□ -0.73
Npas1P97459 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.49□□□□□ -0.73
Npas1P97459 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.49□□□□□ -0.73
Npas1P97459 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 Gm24245-201ENSMUST00000157318 57 ntBASIC10.49□□□□□ -0.73
Npas1P97459 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Npas1P97459 Gm2213-201ENSMUST00000197485 688 ntBASIC10.49□□□□□ -0.73
Npas1P97459 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.49□□□□□ -0.73
Npas1P97459 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.49□□□□□ -0.73
Npas1P97459 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Npas1P97459 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.49□□□□□ -0.73
Npas1P97459 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.49□□□□□ -0.73
Npas1P97459 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Npas1P97459 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.48□□□□□ -0.73
Npas1P97459 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.48□□□□□ -0.73
Npas1P97459 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.48□□□□□ -0.73
Npas1P97459 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Gm38144-201ENSMUST00000192790 465 ntBASIC10.48□□□□□ -0.73
Npas1P97459 Gm2756-201ENSMUST00000195851 400 ntBASIC10.48□□□□□ -0.73
Npas1P97459 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.48□□□□□ -0.73
Npas1P97459 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Npas1P97459 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.48□□□□□ -0.73
Npas1P97459 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.48□□□□□ -0.73
Npas1P97459 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.48□□□□□ -0.73
Npas1P97459 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.48□□□□□ -0.73
Npas1P97459 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms