Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm14277-201ENSMUST00000121195 360 ntBASIC13.7□□□□□ -0.22
Lig3P97386 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Lig3P97386 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Gm5781-201ENSMUST00000219792 443 ntBASIC13.7□□□□□ -0.22
Lig3P97386 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.7□□□□□ -0.22
Lig3P97386 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Lig3P97386 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Lig3P97386 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Lig3P97386 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lig3P97386 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.7□□□□□ -0.22
Lig3P97386 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lig3P97386 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Lig3P97386 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lig3P97386 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lig3P97386 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.69□□□□□ -0.22
Lig3P97386 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Lig3P97386 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Gm24548-201ENSMUST00000158650 108 ntBASIC13.69□□□□□ -0.22
Lig3P97386 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.69□□□□□ -0.22
Lig3P97386 Mir7032-201ENSMUST00000185154 79 ntBASIC13.69□□□□□ -0.22
Lig3P97386 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.69□□□□□ -0.22
Lig3P97386 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.69□□□□□ -0.22
Lig3P97386 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.69□□□□□ -0.22
Lig3P97386 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Lig3P97386 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lig3P97386 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lig3P97386 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.68□□□□□ -0.22
Lig3P97386 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lig3P97386 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lig3P97386 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Lig3P97386 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.68□□□□□ -0.22
Lig3P97386 Gm8959-201ENSMUST00000213150 571 ntBASIC13.68□□□□□ -0.22
Lig3P97386 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.68□□□□□ -0.22
Lig3P97386 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Lig3P97386 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lig3P97386 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.68□□□□□ -0.22
Lig3P97386 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 169.5 ms