Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC8.22□□□□□ -1.09
PrkdcP97313 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
PrkdcP97313 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm15625-201ENSMUST00000117617 1093 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm5395-201ENSMUST00000121650 915 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm25492-201ENSMUST00000157383 129 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm23582-201ENSMUST00000158530 139 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC8.22□□□□□ -1.09
PrkdcP97313 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
PrkdcP97313 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm10371-202ENSMUST00000228010 1081 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
PrkdcP97313 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
PrkdcP97313 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
PrkdcP97313 Gm37513-201ENSMUST00000194830 2268 ntBASIC8.21□□□□□ -1.09
PrkdcP97313 Gm38378-201ENSMUST00000195153 2268 ntBASIC8.21□□□□□ -1.09
PrkdcP97313 Gm23745-201ENSMUST00000104230 125 ntBASIC8.21□□□□□ -1.09
PrkdcP97313 Gm23595-201ENSMUST00000104306 130 ntBASIC8.21□□□□□ -1.09
PrkdcP97313 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC8.21□□□□□ -1.09
PrkdcP97313 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Gm30946-201ENSMUST00000198288 724 ntBASIC8.21□□□□□ -1.09
PrkdcP97313 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC8.21□□□□□ -1.09
PrkdcP97313 Gm18035-201ENSMUST00000211962 589 ntBASIC8.21□□□□□ -1.09
PrkdcP97313 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC8.21□□□□□ -1.09
PrkdcP97313 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
PrkdcP97313 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
PrkdcP97313 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
PrkdcP97313 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
PrkdcP97313 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
PrkdcP97313 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PrkdcP97313 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Gm43858-201ENSMUST00000199418 1778 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
PrkdcP97313 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 AC164702.1-201ENSMUST00000220135 2212 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PrkdcP97313 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
PrkdcP97313 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PrkdcP97313 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Gm21778-201ENSMUST00000178779 471 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
PrkdcP97313 AC154305.4-201ENSMUST00000224520 614 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 AC156790.2-201ENSMUST00000227115 568 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PrkdcP97313 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
PrkdcP97313 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC8.21□□□□□ -1.1
PrkdcP97313 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Gm37014-201ENSMUST00000194723 2253 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC8.21□□□□□ -1.1
PrkdcP97313 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
PrkdcP97313 AC174797.1-201ENSMUST00000224339 1649 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
PrkdcP97313 AC124613.1-201ENSMUST00000198711 88 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 Gm43106-201ENSMUST00000199485 637 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC8.21□□□□□ -1.1
PrkdcP97313 CT010506.1-201ENSMUST00000223673 349 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 AC154213.1-201ENSMUST00000228234 583 ntBASIC8.21□□□□□ -1.1
PrkdcP97313 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PrkdcP97313 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms