Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trim43cP86449 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Gm10076-201ENSMUST00000073238 384 ntBASIC13.58□□□□□ -0.24
Trim43cP86449 Gm10478-201ENSMUST00000084451 396 ntBASIC13.58□□□□□ -0.24
Trim43cP86449 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Trim43cP86449 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim43cP86449 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Gm12742-201ENSMUST00000117326 410 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Gm11531-201ENSMUST00000117614 555 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim43cP86449 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.57□□□□□ -0.24
Trim43cP86449 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim43cP86449 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Gm27390-201ENSMUST00000184516 176 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Gm42693-201ENSMUST00000196779 631 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Morn2-202ENSMUST00000227729 656 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43cP86449 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Trim43cP86449 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.57□□□□□ -0.24
Trim43cP86449 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim43cP86449 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim43cP86449 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.56□□□□□ -0.24
Trim43cP86449 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim43cP86449 Gm13570-201ENSMUST00000140763 309 ntBASIC13.56□□□□□ -0.24
Trim43cP86449 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Gm24845-201ENSMUST00000158034 109 ntBASIC13.56□□□□□ -0.24
Trim43cP86449 Gm25043-201ENSMUST00000158604 212 ntBASIC13.56□□□□□ -0.24
Trim43cP86449 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Gm2546-201ENSMUST00000182630 991 ntBASIC13.56□□□□□ -0.24
Trim43cP86449 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.56□□□□□ -0.24
Trim43cP86449 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.56□□□□□ -0.24
Trim43cP86449 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim43cP86449 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim43cP86449 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim43cP86449 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms