Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.73□□□□□ -0.53
Cxcr4P70658 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Gm27514-201ENSMUST00000183692 110 ntBASIC11.73□□□□□ -0.53
Cxcr4P70658 Gm28693-202ENSMUST00000190758 331 ntBASIC11.73□□□□□ -0.53
Cxcr4P70658 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Gm10478-201ENSMUST00000084451 396 ntBASIC11.73□□□□□ -0.53
Cxcr4P70658 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcr4P70658 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cxcr4P70658 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cxcr4P70658 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm11637-201ENSMUST00000120601 592 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm26185-201ENSMUST00000157692 266 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm9630-201ENSMUST00000178304 885 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Mir339-201ENSMUST00000083659 96 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.72□□□□□ -0.53
Cxcr4P70658 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcr4P70658 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Cxcr4P70658 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cxcr4P70658 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcr4P70658 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Cxcr4P70658 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cxcr4P70658 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcr4P70658 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cxcr4P70658 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcr4P70658 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cxcr4P70658 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cxcr4P70658 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcr4P70658 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms