Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim4P70271 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim4P70271 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim4P70271 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim4P70271 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim4P70271 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.43□□□□□ -0.74
Pdlim4P70271 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.43□□□□□ -0.74
Pdlim4P70271 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Gm7809-201ENSMUST00000153199 742 ntBASIC10.43□□□□□ -0.74
Pdlim4P70271 Gm25261-201ENSMUST00000157416 134 ntBASIC10.43□□□□□ -0.74
Pdlim4P70271 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Gm6222-202ENSMUST00000182143 629 ntBASIC10.43□□□□□ -0.74
Pdlim4P70271 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.43□□□□□ -0.74
Pdlim4P70271 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim4P70271 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.43□□□□□ -0.74
Pdlim4P70271 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.42□□□□□ -0.74
Pdlim4P70271 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Pdlim4P70271 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.42□□□□□ -0.74
Pdlim4P70271 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm13492-201ENSMUST00000119772 665 ntBASIC10.42□□□□□ -0.74
Pdlim4P70271 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.42□□□□□ -0.74
Pdlim4P70271 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm5781-201ENSMUST00000219792 443 ntBASIC10.42□□□□□ -0.74
Pdlim4P70271 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.42□□□□□ -0.74
Pdlim4P70271 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm24526-201ENSMUST00000082921 158 ntBASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm10478-201ENSMUST00000084451 396 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms