Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ThraP63058 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.68□□□□□ -0.38
ThraP63058 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.68□□□□□ -0.38
ThraP63058 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ThraP63058 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.68□□□□□ -0.38
ThraP63058 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ThraP63058 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ThraP63058 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.68□□□□□ -0.38
ThraP63058 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ThraP63058 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.67□□□□□ -0.38
ThraP63058 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.67□□□□□ -0.38
ThraP63058 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ThraP63058 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.67□□□□□ -0.38
ThraP63058 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ThraP63058 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ThraP63058 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ThraP63058 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ThraP63058 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ThraP63058 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ThraP63058 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.67□□□□□ -0.38
ThraP63058 Gm12363-201ENSMUST00000122250 668 ntBASIC12.67□□□□□ -0.38
ThraP63058 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Gm3890-201ENSMUST00000182416 207 ntBASIC12.67□□□□□ -0.38
ThraP63058 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.67□□□□□ -0.38
ThraP63058 Gm4768-201ENSMUST00000206199 686 ntBASIC12.67□□□□□ -0.38
ThraP63058 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ThraP63058 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ThraP63058 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ThraP63058 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ThraP63058 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.67□□□□□ -0.38
ThraP63058 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.67□□□□□ -0.38
ThraP63058 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.67□□□□□ -0.38
ThraP63058 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ThraP63058 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
ThraP63058 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
ThraP63058 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ThraP63058 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ThraP63058 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ThraP63058 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.66□□□□□ -0.38
ThraP63058 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.66□□□□□ -0.38
ThraP63058 Gm26083-201ENSMUST00000157904 193 ntBASIC12.66□□□□□ -0.38
ThraP63058 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Gm2991-201ENSMUST00000173338 480 ntBASIC12.66□□□□□ -0.38
ThraP63058 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.66□□□□□ -0.38
ThraP63058 Gm37259-201ENSMUST00000193903 849 ntBASIC12.66□□□□□ -0.38
ThraP63058 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
ThraP63058 Gm7046-201ENSMUST00000221351 977 ntBASIC12.66□□□□□ -0.38
ThraP63058 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.66□□□□□ -0.38
ThraP63058 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
ThraP63058 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ThraP63058 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms