Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.04□□□□□ -0.64
Sec61a1P61620 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.04□□□□□ -0.64
Sec61a1P61620 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sec61a1P61620 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.04□□□□□ -0.64
Sec61a1P61620 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sec61a1P61620 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.03□□□□□ -0.64
Sec61a1P61620 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.03□□□□□ -0.64
Sec61a1P61620 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sec61a1P61620 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.03□□□□□ -0.64
Sec61a1P61620 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.03□□□□□ -0.64
Sec61a1P61620 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sec61a1P61620 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.03□□□□□ -0.64
Sec61a1P61620 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.03□□□□□ -0.64
Sec61a1P61620 Gm44124-201ENSMUST00000204159 472 ntBASIC11.03□□□□□ -0.64
Sec61a1P61620 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.03□□□□□ -0.64
Sec61a1P61620 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sec61a1P61620 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Sec61a1P61620 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.03□□□□□ -0.64
Sec61a1P61620 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a1P61620 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a1P61620 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a1P61620 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a1P61620 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a1P61620 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.02□□□□□ -0.64
Sec61a1P61620 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.02□□□□□ -0.64
Sec61a1P61620 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.02□□□□□ -0.64
Sec61a1P61620 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a1P61620 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a1P61620 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.02□□□□□ -0.65
Sec61a1P61620 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Gm24644-201ENSMUST00000157114 139 ntBASIC11.02□□□□□ -0.65
Sec61a1P61620 Gm22331-201ENSMUST00000158066 136 ntBASIC11.02□□□□□ -0.65
Sec61a1P61620 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Gm29649-201ENSMUST00000185649 419 ntBASIC11.02□□□□□ -0.65
Sec61a1P61620 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.02□□□□□ -0.65
Sec61a1P61620 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.02□□□□□ -0.65
Sec61a1P61620 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.02□□□□□ -0.65
Sec61a1P61620 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.02□□□□□ -0.65
Sec61a1P61620 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.02□□□□□ -0.65
Sec61a1P61620 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms