Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sf3b6P59708 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm11424-201ENSMUST00000121929 829 ntBASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.1□□□□□ -0.63
Sf3b6P59708 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.1□□□□□ -0.63
Sf3b6P59708 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.1□□□□□ -0.63
Sf3b6P59708 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.1□□□□□ -0.63
Sf3b6P59708 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sf3b6P59708 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm6180-201ENSMUST00000065243 498 ntBASIC11.1□□□□□ -0.63
Sf3b6P59708 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sf3b6P59708 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.1□□□□□ -0.63
Sf3b6P59708 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.09□□□□□ -0.63
Sf3b6P59708 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.09□□□□□ -0.63
Sf3b6P59708 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Gm15371-201ENSMUST00000117057 784 ntBASIC11.09□□□□□ -0.63
Sf3b6P59708 Gm12384-201ENSMUST00000119228 919 ntBASIC11.09□□□□□ -0.63
Sf3b6P59708 Gm11918-201ENSMUST00000121660 179 ntBASIC11.09□□□□□ -0.63
Sf3b6P59708 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.09□□□□□ -0.63
Sf3b6P59708 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.09□□□□□ -0.63
Sf3b6P59708 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sf3b6P59708 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3b6P59708 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sf3b6P59708 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Sf3b6P59708 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sf3b6P59708 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Sf3b6P59708 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms