Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nphp4P59240 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC16.75■□□□□ 0.27
Nphp4P59240 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Gm6189-201ENSMUST00000164487 2082 ntBASIC16.75■□□□□ 0.27
Nphp4P59240 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Gm13611-201ENSMUST00000118269 318 ntBASIC16.75■□□□□ 0.27
Nphp4P59240 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC16.75■□□□□ 0.27
Nphp4P59240 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.75■□□□□ 0.27
Nphp4P59240 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Nphp4P59240 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.75■□□□□ 0.27
Nphp4P59240 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.75■□□□□ 0.27
Nphp4P59240 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.75■□□□□ 0.27
Nphp4P59240 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nphp4P59240 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Nphp4P59240 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nphp4P59240 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.74■□□□□ 0.27
Nphp4P59240 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Gm13461-201ENSMUST00000120980 662 ntBASIC16.74■□□□□ 0.27
Nphp4P59240 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC16.74■□□□□ 0.27
Nphp4P59240 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC16.74■□□□□ 0.27
Nphp4P59240 Gm9550-201ENSMUST00000161130 862 ntBASIC16.74■□□□□ 0.27
Nphp4P59240 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Nphp4P59240 Gm38228-201ENSMUST00000193169 1293 ntBASIC16.74■□□□□ 0.27
Nphp4P59240 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.74■□□□□ 0.27
Nphp4P59240 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nphp4P59240 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nphp4P59240 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC16.74■□□□□ 0.27
Nphp4P59240 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nphp4P59240 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nphp4P59240 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nphp4P59240 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nphp4P59240 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nphp4P59240 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nphp4P59240 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nphp4P59240 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12616-201ENSMUST00000118594 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC16.73■□□□□ 0.27
Nphp4P59240 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12624-201ENSMUST00000177615 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12621-201ENSMUST00000177760 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm4310-201ENSMUST00000177847 889 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12615-201ENSMUST00000177970 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12622-201ENSMUST00000177975 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12627-201ENSMUST00000178412 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12625-201ENSMUST00000179122 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12614-201ENSMUST00000179586 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm12613-201ENSMUST00000180323 382 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Gm7467-201ENSMUST00000185173 652 ntBASIC16.73■□□□□ 0.27
Nphp4P59240 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC16.73■□□□□ 0.27
Nphp4P59240 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC16.73■□□□□ 0.27
Nphp4P59240 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.73■□□□□ 0.27
Nphp4P59240 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nphp4P59240 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.73■□□□□ 0.27
Nphp4P59240 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nphp4P59240 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms