Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.81□□□□□ -0.52
Nup43P59235 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.81□□□□□ -0.52
Nup43P59235 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.81□□□□□ -0.52
Nup43P59235 Gm8227-201ENSMUST00000223306 571 ntBASIC11.81□□□□□ -0.52
Nup43P59235 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.81□□□□□ -0.52
Nup43P59235 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.81□□□□□ -0.52
Nup43P59235 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Nup43P59235 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.81□□□□□ -0.52
Nup43P59235 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nup43P59235 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nup43P59235 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.8□□□□□ -0.52
Nup43P59235 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Nup43P59235 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Nup43P59235 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Nup43P59235 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Gm6754-201ENSMUST00000117124 913 ntBASIC11.8□□□□□ -0.52
Nup43P59235 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.8□□□□□ -0.52
Nup43P59235 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Nup43P59235 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.8□□□□□ -0.52
Nup43P59235 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.8□□□□□ -0.52
Nup43P59235 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.8□□□□□ -0.52
Nup43P59235 Gm9368-201ENSMUST00000219348 831 ntBASIC11.8□□□□□ -0.52
Nup43P59235 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nup43P59235 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.8□□□□□ -0.52
Nup43P59235 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.8□□□□□ -0.52
Nup43P59235 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.8□□□□□ -0.52
Nup43P59235 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nup43P59235 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.8□□□□□ -0.52
Nup43P59235 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nup43P59235 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Nup43P59235 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup43P59235 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.79□□□□□ -0.52
Nup43P59235 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.79□□□□□ -0.52
Nup43P59235 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Gm12314-201ENSMUST00000118104 538 ntBASIC11.79□□□□□ -0.52
Nup43P59235 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.79□□□□□ -0.52
Nup43P59235 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Gm20614-201ENSMUST00000177106 632 ntBASIC11.79□□□□□ -0.52
Nup43P59235 Gm27243-201ENSMUST00000183964 521 ntBASIC11.79□□□□□ -0.52
Nup43P59235 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.79□□□□□ -0.52
Nup43P59235 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.79□□□□□ -0.52
Nup43P59235 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.79□□□□□ -0.52
Nup43P59235 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.79□□□□□ -0.52
Nup43P59235 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.79□□□□□ -0.52
Nup43P59235 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.79□□□□□ -0.52
Nup43P59235 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.79□□□□□ -0.52
Nup43P59235 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.79□□□□□ -0.52
Nup43P59235 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Gm10076-201ENSMUST00000073238 384 ntBASIC11.79□□□□□ -0.52
Nup43P59235 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.79□□□□□ -0.52
Nup43P59235 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.79□□□□□ -0.52
Nup43P59235 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Nup43P59235 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms