Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm15321-201ENSMUST00000121290 288 ntBASIC13.93□□□□□ -0.18
Tpm1P58771 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.93□□□□□ -0.18
Tpm1P58771 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.93□□□□□ -0.18
Tpm1P58771 Mir6956-201ENSMUST00000183598 62 ntBASIC13.93□□□□□ -0.18
Tpm1P58771 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.93□□□□□ -0.18
Tpm1P58771 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.93□□□□□ -0.18
Tpm1P58771 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.93□□□□□ -0.18
Tpm1P58771 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.93□□□□□ -0.18
Tpm1P58771 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tpm1P58771 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.93□□□□□ -0.18
Tpm1P58771 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tpm1P58771 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Syt7-204ENSMUST00000223586 1344 ntBASIC13.92□□□□□ -0.18
Tpm1P58771 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tpm1P58771 Map1b-203ENSMUST00000223725 2669 ntBASIC13.92□□□□□ -0.18
Tpm1P58771 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Gm5687-201ENSMUST00000118252 640 ntBASIC13.92□□□□□ -0.18
Tpm1P58771 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
Tpm1P58771 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.92□□□□□ -0.18
Tpm1P58771 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.92□□□□□ -0.18
Tpm1P58771 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Tpm1P58771 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tpm1P58771 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tpm1P58771 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Tpm1P58771 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tpm1P58771 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Gm25927-201ENSMUST00000175058 117 ntBASIC13.91□□□□□ -0.18
Tpm1P58771 Gm42612-201ENSMUST00000197986 623 ntBASIC13.91□□□□□ -0.18
Tpm1P58771 Gm43170-201ENSMUST00000199827 612 ntBASIC13.91□□□□□ -0.18
Tpm1P58771 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.91□□□□□ -0.18
Tpm1P58771 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.91□□□□□ -0.18
Tpm1P58771 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Mir339-201ENSMUST00000083659 96 ntBASIC13.91□□□□□ -0.18
Tpm1P58771 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tpm1P58771 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.91□□□□□ -0.18
Tpm1P58771 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.91□□□□□ -0.18
Tpm1P58771 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.91□□□□□ -0.18
Tpm1P58771 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tpm1P58771 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tpm1P58771 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tpm1P58771 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Gm14921-201ENSMUST00000118643 908 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms