Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm8566-201ENSMUST00000120174 465 ntBASIC12.01□□□□□ -0.49
Sox3P53784 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.01□□□□□ -0.49
Sox3P53784 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox3P53784 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.01□□□□□ -0.49
Sox3P53784 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox3P53784 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox3P53784 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox3P53784 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.01□□□□□ -0.49
Sox3P53784 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.01□□□□□ -0.49
Sox3P53784 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.01□□□□□ -0.49
Sox3P53784 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Sox3P53784 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.01□□□□□ -0.49
Sox3P53784 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sox3P53784 Mir874-201ENSMUST00000104769 76 ntBASIC12□□□□□ -0.49
Sox3P53784 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sox3P53784 Gm16479-201ENSMUST00000121706 932 ntBASIC12□□□□□ -0.49
Sox3P53784 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12□□□□□ -0.49
Sox3P53784 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12□□□□□ -0.49
Sox3P53784 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox3P53784 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sox3P53784 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12□□□□□ -0.49
Sox3P53784 Gm43058-201ENSMUST00000197645 625 ntBASIC12□□□□□ -0.49
Sox3P53784 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12□□□□□ -0.49
Sox3P53784 Gm19163-201ENSMUST00000223313 780 ntBASIC12□□□□□ -0.49
Sox3P53784 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox3P53784 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12□□□□□ -0.49
Sox3P53784 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox3P53784 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.99□□□□□ -0.49
Sox3P53784 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox3P53784 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox3P53784 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Sox3P53784 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox3P53784 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.99□□□□□ -0.49
Sox3P53784 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Paupar-201ENSMUST00000194826 3482 ntBASIC11.99□□□□□ -0.49
Sox3P53784 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox3P53784 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox3P53784 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.99□□□□□ -0.49
Sox3P53784 Gm13665-201ENSMUST00000120830 528 ntBASIC11.99□□□□□ -0.49
Sox3P53784 Gm12363-201ENSMUST00000122250 668 ntBASIC11.99□□□□□ -0.49
Sox3P53784 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox3P53784 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Sox3P53784 Gm28450-201ENSMUST00000187349 638 ntBASIC11.99□□□□□ -0.49
Sox3P53784 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.99□□□□□ -0.49
Sox3P53784 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Sox3P53784 Gm5051-201ENSMUST00000204085 485 ntBASIC11.99□□□□□ -0.49
Sox3P53784 Gm4768-201ENSMUST00000206199 686 ntBASIC11.99□□□□□ -0.49
Sox3P53784 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms