Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
TgfaP48030 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TgfaP48030 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TgfaP48030 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
TgfaP48030 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.85□□□□□ -0.67
TgfaP48030 Gm17391-201ENSMUST00000171036 126 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.85□□□□□ -0.67
TgfaP48030 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Gm9540-201ENSMUST00000188230 478 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Gm42937-201ENSMUST00000197360 752 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.85□□□□□ -0.67
TgfaP48030 Gm270-201ENSMUST00000223010 976 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.85□□□□□ -0.67
TgfaP48030 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
TgfaP48030 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TgfaP48030 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.85□□□□□ -0.67
TgfaP48030 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.85□□□□□ -0.67
TgfaP48030 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TgfaP48030 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TgfaP48030 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.84□□□□□ -0.67
TgfaP48030 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.84□□□□□ -0.67
TgfaP48030 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Gm12196-201ENSMUST00000120954 262 ntBASIC10.84□□□□□ -0.67
TgfaP48030 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.84□□□□□ -0.67
TgfaP48030 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.84□□□□□ -0.67
TgfaP48030 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.84□□□□□ -0.67
TgfaP48030 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Gm45550-201ENSMUST00000209380 946 ntBASIC10.84□□□□□ -0.67
TgfaP48030 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
TgfaP48030 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.84□□□□□ -0.67
TgfaP48030 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.84□□□□□ -0.67
TgfaP48030 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.84□□□□□ -0.67
TgfaP48030 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
TgfaP48030 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
TgfaP48030 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.84□□□□□ -0.67
TgfaP48030 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.84□□□□□ -0.67
TgfaP48030 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms