Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.68□□□□□ -0.22
Rpl13P47963 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.68□□□□□ -0.22
Rpl13P47963 Gm24548-201ENSMUST00000158650 108 ntBASIC13.68□□□□□ -0.22
Rpl13P47963 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpl13P47963 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Gm44405-201ENSMUST00000198952 126 ntBASIC13.68□□□□□ -0.22
Rpl13P47963 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.68□□□□□ -0.22
Rpl13P47963 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Rpl13P47963 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpl13P47963 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.68□□□□□ -0.22
Rpl13P47963 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.68□□□□□ -0.22
Rpl13P47963 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.68□□□□□ -0.22
Rpl13P47963 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.68□□□□□ -0.22
Rpl13P47963 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl13P47963 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpl13P47963 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpl13P47963 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rpl13P47963 Snora78-201ENSMUST00000158630 128 ntBASIC13.67□□□□□ -0.22
Rpl13P47963 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Gm27514-201ENSMUST00000183692 110 ntBASIC13.67□□□□□ -0.22
Rpl13P47963 Gm5370-201ENSMUST00000187187 574 ntBASIC13.67□□□□□ -0.22
Rpl13P47963 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpl13P47963 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rpl13P47963 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Rpl13P47963 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl13P47963 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Rpl13P47963 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rpl13P47963 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rpl13P47963 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.66□□□□□ -0.22
Rpl13P47963 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Rpl13P47963 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.66□□□□□ -0.22
Rpl13P47963 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Rpl13P47963 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpl13P47963 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.66□□□□□ -0.22
Rpl13P47963 Gm6007-201ENSMUST00000208170 823 ntBASIC13.66□□□□□ -0.22
Rpl13P47963 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rpl13P47963 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl13P47963 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms