Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-6P43688 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-6P43688 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-6P43688 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-6P43688 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-6P43688 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-6P43688 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.84□□□□□ -0.51
Nkx2-6P43688 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-6P43688 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-6P43688 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-6P43688 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.51
Nkx2-6P43688 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
Nkx2-6P43688 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-6P43688 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Nkx2-6P43688 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-6P43688 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm13296-201ENSMUST00000117854 997 ntBASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm14277-201ENSMUST00000121195 360 ntBASIC11.82□□□□□ -0.52
Nkx2-6P43688 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm28882-201ENSMUST00000185504 314 ntBASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm19187-201ENSMUST00000206781 892 ntBASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.82□□□□□ -0.52
Nkx2-6P43688 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.82□□□□□ -0.52
Nkx2-6P43688 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.82□□□□□ -0.52
Nkx2-6P43688 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Nkx2-6P43688 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Nkx2-6P43688 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-6P43688 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx2-6P43688 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms