Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
HttP42859 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.88□□□□□ -0.35
HttP42859 Gm43380-201ENSMUST00000200421 220 ntBASIC12.88□□□□□ -0.35
HttP42859 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HttP42859 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HttP42859 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HttP42859 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HttP42859 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.88□□□□□ -0.35
HttP42859 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.88□□□□□ -0.35
HttP42859 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HttP42859 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Gm11660-201ENSMUST00000120955 412 ntBASIC12.88□□□□□ -0.35
HttP42859 Mir432-201ENSMUST00000157230 75 ntBASIC12.88□□□□□ -0.35
HttP42859 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.88□□□□□ -0.35
HttP42859 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.88□□□□□ -0.35
HttP42859 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HttP42859 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.88□□□□□ -0.35
HttP42859 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.88□□□□□ -0.35
HttP42859 Gm22388-201ENSMUST00000158194 248 ntBASIC12.88□□□□□ -0.35
HttP42859 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Gm38117-201ENSMUST00000194653 939 ntBASIC12.88□□□□□ -0.35
HttP42859 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.88□□□□□ -0.35
HttP42859 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.88□□□□□ -0.35
HttP42859 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HttP42859 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
HttP42859 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HttP42859 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
HttP42859 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.87□□□□□ -0.35
HttP42859 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
HttP42859 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.87□□□□□ -0.35
HttP42859 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.87□□□□□ -0.35
HttP42859 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
HttP42859 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
HttP42859 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.87□□□□□ -0.35
HttP42859 Gm11996-201ENSMUST00000117538 915 ntBASIC12.87□□□□□ -0.35
HttP42859 Gm13039-201ENSMUST00000118638 794 ntBASIC12.87□□□□□ -0.35
HttP42859 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HttP42859 Gm44216-201ENSMUST00000203942 157 ntBASIC12.87□□□□□ -0.35
HttP42859 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
HttP42859 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HttP42859 Gm23439-201ENSMUST00000104292 132 ntBASIC12.86□□□□□ -0.35
HttP42859 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.86□□□□□ -0.35
HttP42859 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.86□□□□□ -0.35
HttP42859 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.86□□□□□ -0.35
HttP42859 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.86□□□□□ -0.35
HttP42859 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HttP42859 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.86□□□□□ -0.35
HttP42859 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HttP42859 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms